an operating theatre...


healthcare informatics landscape...

Healthcare informatics is at an inflection point

Need: a platform that combines multiple data and multiple compute on useful hardware

explosion of sensors

complex analytics

multiple possible data sources

lack of local compute resources


silos...

Multiple, deep data sets exist in the healthcare dataverse

Largely disconnected and independent of each other

clinical

billing

health records


sparse dataverse...

data points, rich as they are, can be insufficient...

the more connections between points...


data needs "connectedness"

the better!


medical compute... in the cloud

definite need for data mobility and centralization...

with compute being "free" to process data where-ever it might naturally collect...


ChRIS...

ChRIS is a bio-medical data workflow manage that allows easy and intuitive collection, analysis, and sharing of data between parties.

  • allows for advanced view rendering
  • allows for sharing of images
  • allows for immersive real time collaboration
  • allows for post-processing of images

many data sources... many compute sources...

via here

connect data here

to here...

and compute!


distributed design...

web server

coordinator

data handler

compute handler


distributed design...

Red Hat collaboration


compute and io...

disparate, disconnected computing

data needs to be transferred from server host to remote location

data needs to be processed on remote location


io

local web server

data descriptor

data handler


compute

local web server

exec descriptor

exec handler


coordination

timing can be complex...

PUSH data

separate coordinator service

WAIT!

EXEC on data

WAIT!

PULL data

WAIT!


coordination


conclusion

  • Healthcare compute is at an inflection point
  • Lags larger computing -verse
  • Many opportunities and challenges exist

Untapped opportunity to integrate cutting edge approaches to inform healthcare


references... ChRIS

  • https://github.com/FNNDSC/ChRIS_ultron_backEnd
  • https://github.com/FNNDSC/ChRIS_ultron_frontEnd

references... services

 
  • https://github.com/FNNDSC/viewerjs
  • https://github.com/FNNDSC/gcjs
  • https://github.com/FNNDSC/fmjs
  • https://github.com/FNNDSC/toolbarjs
  • https://github.com/FNNDSC/rboxjs
  • https://github.com/FNNDSC/rendererjs
  • https://github.com/FNNDSC/thbarjs
  • https://github.com/FNNDSC/pman
  • https://github.com/FNNDSC/pfioh
  • https://github.com/FNNDSC/pfcon

references... viewers

  • https://goxtk.com

  • https://github.com/FNNDSC/ami

team

  • Jorge Bernal
  • Nicolas Rannou
  • Rudolph  Pienaar
  • Yangming Ou
  • Daniel Haehn
  • Daniel Ginsburg
  • Ellen Grant

BCH Team

BU Team

  • Orran Krieger
  • Ata Turk
  • Aditya Awalker

RedHat

  • Dan McPherson
  • and others!

fin!

Thank you!