Kemp, S. (2019). Digital 2019: Global Internet Use Accelerates. Retrieved from wearesocial: https://wearesocial. com/blog/2019/01/digital-2019-global-internet-useaccelerates.
The Sloan Digital Sky Survey (SDSS) project revolutionized the field of astronomy:
Feigelson, E. D. and Babu, G. J. (2012). Big data in astronomy. Significance , 9(4):22– 25.
In 2009 the U.S government launched data.gov releasing more than 450,000 datasets over the next 3 years allowing many projects for improving citizen's lives:
Fraiberger et al. quantified reputation and success in art. They created an exhibition network of museums and galleries and used it to discover communities of institutions that exchange art. Additionally, they create a Markov model that can predict the evolution of an individual artist career.
Fraiberger, S. P., Sinatra, R., Resch, M., Riedl, C., & Barabási, A. L. (2018). Quantifying reputation and success in art. Science, 362(6416), 825-829.
Fire and Guestrin analyzed over 120 million papers to examine how the academic publishing world has evolved over the last century.
Fire, M., & Guestrin, C. (2019). Over-optimization of academic publishing metrics: observing Goodhart’s Law in action. GigaScience, 8(6), giz053.
Data Collection
Data Collection
Dataset Creation
2. We clean and prepossess the raw data.
Data Collection
Dataset Creation
NLP
3. We use NLP methods such as NER, word embedding, etc. to add additional dimensions to the dataset.
Data Collection
Dataset Creation
NLP
Fusion With Additional Datasets
4. We fuse the collected datasets.
Data Collection
Dataset Creation
NLP
Fusion With Additional Datasets
Temporal Analysis
SNA
Classifier Construction
5. We extract insights using temporal analysis, social network analysis, and ML-based methods.
Data Collection
Dataset Creation
NLP
Fusion With Additional Datasets
Temporal Analysis
SNA
Classifier Construction
Am I to understand you're still hanging
around with Dr. Emmett Brown, McFly?
Marty McFly
Lorraine McFly
George McFly
Subtitles
Cast Data
Cast Data
Subtitles Web Crawler
Subtitles Dataset
NER
Movie Social Networks Dataset
Temporal Analysis of Gender
Cast Extractor
Cast Dataset
THE SCULLY EFFECT: I WANT TO BELIEVE IN STEM Research by 21st Century Fox, Geena Davis Institute on Gender in Media, and J. Walter Thompson Intelligence
7,322
Subtitles
Cast Data
Cast Data
Network Features
Vertex Feature
Gender Representation
Movie Feature
Actor Features
| Feature | Feature Importance |
|---|---|
| Percent of Triangles of 2 Women | 0.15797 |
| Percent of Triangles of 0 Women | 0.14502 |
| Females in Top 10 Roles | 0.13659 |
| Percent of Triangles of 3 Women | 0.12058 |
| Triangles of 3 Women | 0.0743 |
Sadly today only 12% of all movies pass this test.
NetSci 2019, Vermont, USA
ESUN 2019 Zurich Switzerland
MSDSE 2019 Santa FE, NM, USA
Palgrave Communications - Major Revision
Brockmann, D., & Helbing, D. (2013). The hidden geometry of complex, network-driven contagion phenomena. science, 342(6164), 1337-1342.
health is increasing.
To establish infectious disease trends analysis and utilize data science to discover new insights, on the relationships between the real-world occurrence of communicable diseases, such as influenza, malaria, and ebolavirus, and a wide range of temporal associations that have practical implications to public health and scientific research of infections. For instance:
To diseases in the real-world vs the academia, we examined the correlation between the disease impact in the real-world and research rate in academia. To measure the impact we used the GDB dataset from we decided to use DALY (Disability-Adjusted Life Year).
Which venues are the most popular among infectious disease studies in terms of publications?
To study how scientific collaboration changed in the domain of infectious disease, we explored two perspectives:
To study how scientific collaboration changed in the domain of infectious disease, we explored two perspectives:
Using the extracted country data we explored how international collaborations change over time in different infectious diseases.
2. What is the state international collaborations in epidemiology?
ProMED Crawler
ProMED Raw Reports
NER
ProMED Dataset
Temporal Analysis of Infectious Diseases Research
Academic Publications Dataset Downloader
Academic Publications Raw Dataset
Academic Publications Preprocessing
Academic Publications Dataset
Infectious Diseases Research Social Network
ProMED Crawler
ProMED Raw Reports
NER
ProMED Dataset
Temporal Analysis of Infectious Diseases Research
Academic Publications Dataset Downloader
Academic Publications Raw Dataset
Academic Publications Preprocessing
Academic Publications Dataset
Infectious Diseases Research Social Network
GDB Dataset
Temporal Analysis of Infectious Diseases Research
ProMED Official Dataset
Temporal Analysis of Infectious Diseases Research
Academic Publications Dataset Downloader
Academic Publications Raw Dataset
Academic Publications Preprocessing
Academic Publications Dataset
Infectious Diseases Research Social Network
GDB Dataset
Temporal Analysis of Infectious Diseases Research
Academic Publications Dataset Downloader
Academic Publications Raw Dataset
Academic Publications Preprocessing
Academic Publications Dataset
Infectious Diseases Research Social Network
GDB Dataset
Temporal Analysis of Infectious Diseases Research
Performing the analysis we discovered that many diseases that have a high negative or positive correlation between NPR and DALY.
| Disease | Paper Count | Number of Citations | Average Number of Citations |
|---|---|---|---|
| Trichuriasis | 262 | 2377 | 9.14 |
| Hepatitis | 176778 | 1471180 | 8.45 |
| Hiv | 475188 | 3418330 | 7.26 |
| Title | Count |
|---|---|
| PLoS ONE | 11620 |
| AIDS | 7560 |
| Journal of Acquired Immune Deficiency Syndromes | 5247 |
| Journal of Infectious Diseases | 5199 |
| Clinical Infectious Diseases | 4946 |
| International Journal of Tuberculosis and Lung Disease | 3933 |
| Journal of Clinical Microbiology | 3781 |
| Journal of Biological Chemistry | 3471 |
| Infection and Immunity | 3199 |
| American Journal of Tropical Medicine and Hygiene | 3112 |
| Venue | Number of Citations | Average Number of Citations | Paper Count |
|---|---|---|---|
| Nature | 241599 | 42.3412 | 5706 |
| Journal of Virology | 224641 | 21.9226 | 10247 |
| Journal of bacteriology | 157365 | 11.3711 | 13839 |
| PloS one | 153125 | 14.4854 | 10571 |
| Infection and Immunity | 132717 | 15.6303 | 8491 |
| Molecular Microbiology | 109604 | 23.9991 | 4567 |
| Journal of clinical microbiology | 103397 | 13.4948 | 7662 |
| Aids | 98770 | 18.5693 | 5319 |
| New England Journal of Medicine | 76792 | 45.1984 | 1699 |
| Antimicrobial agents and chemotherapy | 72570 | 13.6052 | 5334 |
| Venue | Number of Citations | Average Number of Citations | Paper Count |
|---|---|---|---|
| Molecular systems biology | 10647 | 217.286 | 49 |
| Cellular and molecular biology | 2967 | 123.625 | 24 |
| Nature genetics | 26946 | 115.154 | 234 |
| Embo Journal | 11941 | 108.555 | 110 |
| Annual Review of Immunology | 6381 | 106.35 | 60 |
| Genome research | 8524 | 100.282 | 85 |
| PLoS biology | 10943 | 95.1565 | 115 |
| Clinical microbiology reviews | 16308 | 79.5512 | 205 |
| Journal of health and social behavior | 2424 | 78.1935 | 31 |
| Journal of nanobiotechnology | 1792 | 77.913 | 23 |
| Disease | Average Distinct Countries |
|---|---|
| Malaria | 1.57219 |
| African Trypanosomiasis | 1.50467 |
| Leishmaniasis | 1.47862 |
| Hepatitis B | 1.46758 |
| Dengue | 1.45026 |
| Cystic Echinococcosis | 1.43223 |
| Hiv | 1.4315 |
| Zika Virus | 1.42857 |
| Chagas Disease | 1.42474 |
| Trachoma | 1.4108 |
| … | …. |
| Diphtheria | 1.24589 |
| Leprosy | 1.23681 |
| Pertussis | 1.22829 |
| Herpes Simplex | 1.20117 |
| Ascaris | 1.19054 |
| Escherichia Coli | 1.18061 |
| Trichuriasis | 1.14035 |
| Trichomoniasis | 1.13778 |
| Dracunculiasis | 1.12346 |
| Gonococcal | 1.1085 |
| Paratyphoid | 1.09846 |
Bauckhage, C. (2011, July). Insights into internet memes. In Fifth International AAAI Conference on Weblogs and Social Media.
Weng, L., Flammini, A., Vespignani, A., & Menczer, F. (2012). Competition among memes in a world with limited attention. Scientific reports, 2, 335.
Drakett, J., Rickett, B., Day, K., & Milnes, K. (2018). Old jokes, new media–Online sexism and constructions of gender in Internet memes. Feminism & Psychology, 28(1), 109-127.