an operating theatre...
healthcare informatics landscape...
Healthcare informatics is at an inflection point
Need: a platform that combines multiple data and multiple compute on useful hardware
explosion of sensors
complex analytics
multiple possible data sources
lack of local compute resources
silos...
Multiple, deep data sets exist in the healthcare dataverse
Largely disconnected and independent of each other
clinical
billing
health records
sparse dataverse...
data points, rich as they are, can be insufficient...
the more connections between points...
data needs "connectedness"
the better!
medical compute... in the cloud
definite need for data mobility and centralization...
with compute being "free" to process data where-ever it might naturally collect...
ChRIS...
ChRIS is a bio-medical data workflow manage that allows easy and intuitive collection, analysis, and sharing of data between parties.
- allows for advanced view rendering
- allows for sharing of images
- allows for immersive real time collaboration
- allows for post-processing of images
many data sources... many compute sources...
via here
connect data here
to here...
and compute!
distributed design...
web server
coordinator
data handler
compute handler
distributed design...
Red Hat collaboration
compute and io...
disparate, disconnected computing
data needs to be transferred from server host to remote location
data needs to be processed on remote location
io
local web server
data descriptor
data handler
compute
local web server
exec descriptor
exec handler
coordination
timing can be complex...
PUSH data
separate coordinator service
WAIT!
EXEC on data
WAIT!
PULL data
WAIT!
coordination
conclusion
- Healthcare compute is at an inflection point
- Lags larger computing -verse
- Many opportunities and challenges exist
Untapped opportunity to integrate cutting edge approaches to inform healthcare
references... ChRIS
-
https://github.com/FNNDSC/ChRIS_ultron_backEnd
-
https://github.com/FNNDSC/ChRIS_ultron_frontEnd
references... services
-
https://github.com/FNNDSC/viewerjs
-
https://github.com/FNNDSC/gcjs
-
https://github.com/FNNDSC/fmjs
-
https://github.com/FNNDSC/toolbarjs
-
https://github.com/FNNDSC/rboxjs
-
https://github.com/FNNDSC/rendererjs
-
https://github.com/FNNDSC/thbarjs
-
https://github.com/FNNDSC/pman
-
https://github.com/FNNDSC/pfioh
-
https://github.com/FNNDSC/pfcon
references... viewers
-
https://goxtk.com
-
https://github.com/FNNDSC/ami
team
- Jorge Bernal
- Nicolas Rannou
- Rudolph Pienaar
- Yangming Ou
- Daniel Haehn
- Daniel Ginsburg
- Ellen Grant
BCH Team
BU Team
- Orran Krieger
- Ata Turk
- Aditya Awalker
RedHat
- Dan McPherson
- and others!
fin!
Thank you!
MOC Workshop Talk
By Rudolph Pienaar
MOC Workshop Talk
A general overview of CHIPS
