All decks Close
All decks 84

  • COMP63301 Robustness, security and privacy

    Lecture in COMP63301 Data Engineering Concepts at The University of Manchester.

    Nov 30, 2025 50 0

  • Snakemake Tutorial

    Tutorial slides that complement https://snakemake.readthedocs.io/en/stable/tutorial/tutorial.html

    Nov 23, 2025 271 0

  • COMP63301 Serving

    Lecture in COMP63301 Data Engineering Concepts at The University of Manchester.

    Nov 23, 2025 86 0

  • COMP63301 Integration #2

    Lecture in COMP63301 Data Engineering Concepts at The University of Manchester.

    Nov 09, 2025 177 0

  • DATA71011 PROV

    Provenance with the PROV standard. Lecture in DATA71011 Understanding Data and their Environment at The University of Manchester.

    Oct 21, 2025 247 0

  • COMP16412 Week 8 landing

    Week 8 landing lecture on Collections, generics & stream

    Mar 20, 2025 463 0

  • COMP16412 Week 8 Java Generics

    Java Generics, Optional and Streams. Week 8 in COMP16412.

    Mar 04, 2025 445 0

  • Challenging Linked Data practices for FAIR Research Objects and Computational Workflows

    Presented 2025-02-19 at Inaugural seminar at Department of Computer Science, The University of Manchester

    Feb 18, 2025 450 0

  • FAIR Research Objects and Computational Workflows

    Presented at PhD defence ceremony, University of Amsterdam, 2025-01-15

    Jan 09, 2025 407 0

  • Signposting

    Presented for Croissant working group

    Jan 08, 2025 462 0

  • 2024-11-20 FAIR digital objects

    Presented at NFDI Hackathon at ZBMed 2024-11-20

    Nov 20, 2024 438 1

  • DATA71011 Reproducibility and FAIR

    Oct 23, 2024 901 0

  • 2023-12-07 RO-Crate BY-COVID WP1

    Presented at BY-COVID WP1 call 2023-12-07

    Dec 07, 2023 630 0

  • 2023-11-23 RO-Crate intro ERGA

    Presented at ERGA call 2023-11-23

    Nov 22, 2023 1,281 0

  • FDO RO-Crate w/ Signposting

    Report from ELIXIR biohackathon project 15 "Enabling FAIR Digital Objects using RO-Crate and Signposting"

    Nov 13, 2023 1,161 0

  • 2023-09-25 RO-Crate quick intro

    FAIR-IMPACT Support Offer #2, Workshop #1, 2023-09-25

    Sep 25, 2023 1,514 0

  • 2023-07-11 Computational Workflows

    Jul 11, 2023 792 0

  • Five Safes Crates

    Jul 07, 2023 727 0

  • 2022-02-10 Facing FAIR challenges with RO-Crate

    Presented at FAIR Evaluation stakehodler meeting, GO-FAIR 2022-02-10

    Feb 10, 2022 1,538 0

  • 2021-11-23 RO-Crate Crash course

    Presented 2021-11-23 at ELIXIR Data Interoperability face-to-face

    Nov 23, 2021 2,293 1

  • 2023-07-11 Computational Workflows

    A retake on previous slides

    Oct 07, 2021 2,252 0

  • 2021-10-07 Reproducibility; Research Objects (RO-Crate) and Common Workflow Language (CWL)

    Presented 2021-10-07 at Workshop on Sustainable Software Sustainability (WoSSS21)

    Oct 06, 2021 2,085 0

  • 2021-09-17 Sharing FAIR Research Objects to improve reproducibility

    Presented 2021-09-17 to the Flemish Open Science Board

    Sep 16, 2021 1,808 0

  • 2021-07-15 Sharing FAIR Research Objects to improve reproducibility

    Presented 2021-07-02 at joint meeting of The Canonical Workflow Frameworks for Research (CWFR) and Semantics (SEM) working groups of the FAIR Digital Object Forum initiative.

    Jul 15, 2021 2,679 0

  • 2021-07-02 Introduction to RO-Crate, FAIR workflows and a FAIR Digital Object profile

    Presented 2021-07-02 at joint meeting of The Canonical Workflow Frameworks for Research (CWFR) and Semantics (SEM) working groups of the FAIR Digital Object Forum initiative.

    Jun 29, 2021 2,798 0

  • 2021-06-21 Capturing Just Enough Data, Software and Metadata with RO-Crate

    Jun 21, 2021 2,151 0

  • 2021-06-17 Capturing Just Enough Data, Software and Metadata with RO-Crate

    Jun 17, 2021 2,613 0

  • 2021-06-11 Capturing workflow life cycle with RO-Crate

    Template of 2021 presentations

    Jun 10, 2021 2,670 0

  • 2021-template

    Template of 2021 presentations

    Jun 10, 2021 1,356 1

  • 2021-05-19 Recording provenance with RO-Crate

    2021-05-19 Notes for EOSC-Life retreat 2021, breakout on Provenance of tools and workflows; FAIRification of workflows

    May 19, 2021 2,148 0

  • 2021-01-12 RO-Crate intro

    Presented 2021-01-12 at ad-hoc meeting "Towards Convergence of RO-Crate and FDOF for the Specimen Data Refinery"

    Jan 12, 2021 1,720 0

  • 2020-12-09 RO-Crate intro

    Presented 2020-12-09 at ELIXIR Cloud AAI / WorkflowHub Club joint meeting

    Dec 09, 2020 1,777 0

  • 2020-12-02 Recording provenance with RO-Crate

    Presented 2020-12-02 at International FAIR Convergence Symposium session on FAIR Data Provenance.

    Dec 02, 2020 2,302 0

  • 2020-12-02 Recording provenance with RO-Crate

    Presented 2020-12-02 at International FAIR Convergence Symposium session on FAIR Data Provenance.

    Dec 02, 2020 1,794 0

  • 2020-04-29 Virtual Training CWL tutorial

    BioExcel Virtual Training, 2020-04-29

    Apr 28, 2020 3,194 0

  • 2020-04-29 Reproducible analyses with Common Workflow Language

    BioExcel Virtual Training, 2020-04-29

    Apr 27, 2020 2,740 0

  • 2019-11-13 RO-Crate

    Presented 2019-11-13 for Harvard Data Commons telcon

    Nov 13, 2019 2,421 0

  • 2019-09-24 RO-Crate

    Presented at RO2019, eScience 2019, San Diego 2019-09-24

    Sep 23, 2019 3,237 0

  • 2019-09-18 CWL - Sharing reproducible computational analyses

    Seminar at Cancer Research UK, Manchester 2019-09-18

    Sep 17, 2019 2,686 1

  • 2019-07-24 RO-Crate

    Presented at BOSC 2019 2019-07-24

    Jul 24, 2019 4,550 1

  • 2019-06-28 Research Object Composer

    Presented at DataSTAGE Seven Bridges internal meeting 2019-06-28

    Jun 28, 2019 2,463 0

  • 2019-06-10 Research Objects

    Presented at Open Repositories (OR2019), Hamburg 2019-06-10

    Jun 09, 2019 2,930 0

  • 2019-04-04 Versioning of assets in IBISBA Hub

    Apr 03, 2019 2,374 0

  • 2019-04-04 Assays and Workflow Runs in IBISBA Hub

    Apr 02, 2019 2,857 0

  • 2019-xx-xx IBISBA slide template

    Apr 02, 2019 2,161 1

  • 2019-03-11 Sharing reproducible computational analyses

    Presented at Pistoia Symposium: Application of Bioinformatics in support of Precision Medicine

    Mar 05, 2019 2,779 0

  • 2019 template

    Mar 05, 2019 1,745 0

  • 2018-12-13 CWL Considerations

    Dec 11, 2018 2,252 0

  • 2018-12-11 Common Workflow Language

    Dec 11, 2018 3,930 1

  • 2018-11-01 Making reproducible data packages

    Presented at Open Science @ University College Cork on 2018-11-01

    Nov 01, 2018 2,579 0