All decks Close
All decks 64

  • 2021-10-07 Reproducibility; Research Objects (RO-Crate) and Common Workflow Language (CWL) v2

    A retake on previous slides

    Oct 07, 2021 50 0

  • 2021-10-07 Reproducibility; Research Objects (RO-Crate) and Common Workflow Language (CWL)

    Presented 2021-10-07 at Workshop on Sustainable Software Sustainability (WoSSS21)

    Oct 06, 2021 44 0

  • 2021-09-17 Sharing FAIR Research Objects to improve reproducibility

    Presented 2021-09-17 to the Flemish Open Science Board

    Sep 16, 2021 78 0

  • 2021-07-15 Sharing FAIR Research Objects to improve reproducibility

    Presented 2021-07-02 at joint meeting of The Canonical Workflow Frameworks for Research (CWFR) and Semantics (SEM) working groups of the FAIR Digital Object Forum initiative.

    Jul 15, 2021 250 0

  • 2021-07-02 Introduction to RO-Crate, FAIR workflows and a FAIR Digital Object profile

    Presented 2021-07-02 at joint meeting of The Canonical Workflow Frameworks for Research (CWFR) and Semantics (SEM) working groups of the FAIR Digital Object Forum initiative.

    Jun 29, 2021 275 0

  • 2021-06-21 Capturing Just Enough Data, Software and Metadata with RO-Crate

    Jun 21, 2021 306 0

  • 2021-06-17 Capturing Just Enough Data, Software and Metadata with RO-Crate

    Jun 17, 2021 273 0

  • 2021-06-11 Capturing workflow life cycle with RO-Crate

    Template of 2021 presentations

    Jun 10, 2021 246 0

  • 2021-template

    Template of 2021 presentations

    Jun 10, 2021 138 0

  • 2021-05-19 Recording provenance with RO-Crate

    2021-05-19 Notes for EOSC-Life retreat 2021, breakout on Provenance of tools and workflows; FAIRification of workflows

    May 19, 2021 220 0

  • 2021-01-12 RO-Crate intro

    Presented 2021-01-12 at ad-hoc meeting "Towards Convergence of RO-Crate and FDOF for the Specimen Data Refinery"

    Jan 12, 2021 348 0

  • 2020-12-09 RO-Crate intro

    Presented 2020-12-09 at ELIXIR Cloud AAI / WorkflowHub Club joint meeting

    Dec 09, 2020 378 0

  • 2020-12-02 Recording provenance with RO-Crate

    Presented 2020-12-02 at International FAIR Convergence Symposium session on FAIR Data Provenance.

    Dec 02, 2020 418 0

  • 2020-12-02 Recording provenance with RO-Crate

    Presented 2020-12-02 at International FAIR Convergence Symposium session on FAIR Data Provenance.

    Dec 02, 2020 426 0

  • 2020-04-29 Virtual Training CWL tutorial

    BioExcel Virtual Training, 2020-04-29

    Apr 28, 2020 1,122 0

  • 2020-04-29 Reproducible analyses with Common Workflow Language

    BioExcel Virtual Training, 2020-04-29

    Apr 27, 2020 1,063 0

  • 2019-11-13 RO-Crate

    Presented 2019-11-13 for Harvard Data Commons telcon

    Nov 13, 2019 979 0

  • 2019-09-24 RO-Crate

    Presented at RO2019, eScience 2019, San Diego 2019-09-24

    Sep 23, 2019 1,169 0

  • 2019-09-18 CWL - Sharing reproducible computational analyses

    Seminar at Cancer Research UK, Manchester 2019-09-18

    Sep 17, 2019 1,058 1

  • 2019-07-24 RO-Crate

    Presented at BOSC 2019 2019-07-24

    Jul 24, 2019 1,945 1

  • 2019-06-28 Research Object Composer

    Presented at DataSTAGE Seven Bridges internal meeting 2019-06-28

    Jun 28, 2019 1,060 0

  • 2019-06-10 Research Objects

    Presented at Open Repositories (OR2019), Hamburg 2019-06-10

    Jun 09, 2019 1,099 0

  • 2019-04-04 Versioning of assets in IBISBA Hub

    Apr 03, 2019 989 0

  • 2019-04-04 Assays and Workflow Runs in IBISBA Hub

    Apr 02, 2019 1,253 0

  • 2019-xx-xx IBISBA slide template

    Apr 02, 2019 906 1

  • 2019-03-11 Sharing reproducible computational analyses

    Presented at Pistoia Symposium: Application of Bioinformatics in support of Precision Medicine

    Mar 05, 2019 1,335 0

  • 2019 template

    Mar 05, 2019 474 0

  • 2018-12-13 CWL Considerations

    Dec 11, 2018 982 0

  • 2018-12-11 Common Workflow Language

    Dec 11, 2018 1,847 1

  • 2018-11-01 Making reproducible data packages

    Presented at Open Science @ University College Cork on 2018-11-01

    Nov 01, 2018 1,202 0

  • 2018-10-29 CWLProv

    Presented at Workshop on Research Objects (RO2018) at IEEE eScience 2018, Amsterdam, Netherlands (29 October 2018).

    Oct 29, 2018 1,492 0

  • 2018-09-29 arcp URI scheme

    Presented at Workshop for Research Objects (RO2018), IEEE eScience 2008, Amsterdam Paper: http://s11.no/2018/arcp.html

    Oct 27, 2018 1,219 0

  • 2018-07-03 PASC Common Workflow Language

    Jul 04, 2018 1,680 1

  • 2018-07-03 PASC Common Workflow Language

    Jul 02, 2018 1,371 0

  • 2018-06-15 IBISBA WP7 updates

    Jun 15, 2018 1,251 2

  • 2018-05-15 Research Objects and CWL

    Presented in meeting with BioSimSpace

    May 15, 2018 1,274 0

  • 2018-next-slides

    Brain dump for next slide deck

    May 08, 2018 1,115 0

  • 2018-04-25 Common Workflow Language

    Apr 25, 2018 1,214 0

  • 2018-03-23 arcp URI scheme

    Adapted from https://slides.com/soilandreyes/2018-03-22-rda-research-objects#/ at RDA meeting

    Mar 22, 2018 1,544 0

  • 2018-03-23 Reproducible BioCompute Objects using Common Workflow Language

    ..a metagenomics case study. Presented at 2018 BioCompute Objects Proof of Concept Workshop, Washington DC

    Mar 22, 2018 3,270 1

  • 2018-03-22 Research Objects and CWL

    Presented at Approaches to Research Data Packaging - Research Data Alliance 11th Plenary BoF meeting, Berlin

    Mar 21, 2018 2,279 0

  • 2018-01-26 Research Objects and CWL

    Presented at ELIXIR CWL Implementation Study meeting, Hinxton 2018-01-16

    Jan 26, 2018 2,169 0

  • 2018-01-15 Challenges in interoperable provenance capture with Common Workflow Language and Research Objects

    Presented at RDA-Europe meeting on Data provenance approaches

    Jan 09, 2018 2,074 0

  • 2017-11-16 Common Workflow Language

    Nov 16, 2017 1,420 0

  • 2017-09-27 Research Object

    Sep 27, 2017 1,990 0

  • Testing Twitter embed

    Sep 04, 2017 1,384 0

  • 2017-07-22 Common Workflow Language Viewer

    Presented at BOSC 2017, ISMB/ECCB 2017, Prague. Clone of https://slides.com/markrobinson/cwlviewer with static images

    Jul 22, 2017 1,872 0

  • 2017-07-17 Open PHACTS Docker BioExcel webinar

    Jul 13, 2017 1,496 0

  • 2017-03-17 RO BioCompute

    Feb 09, 2017 2,071 0

  • 2016-12-19 Hive CWL RO example

    Dec 19, 2016 1,621 0

  • 2016-11-10 Research Object Galaxy Python

    Nov 10, 2016 1,677 0

  • 2016-11-21 BioExcel Workflows IG

    Oct 17, 2016 1,642 0

  • 2016-07-28 Open PHACTS data loading

    Jul 28, 2016 1,640 0

  • 2016-07-06 Open PHACTS Docker (static)

    Jul 07, 2016 1,665 0

  • 2016-07-06 Open PHACTS Docker

    Jul 05, 2016 2,185 0

  • 2016-05-18 Make research reproducible again - researchobject.org

    CWL Hackathon, Paris

    May 16, 2016 2,651 1

  • 2016-04-21 BioExcel use case 6 updates: Open PHACTS

    Apr 20, 2016 2,130 0

  • 2016-02-11 BioExcel use case: Open PHACTS

    Feb 10, 2016 1,819 0

  • 2015-10-07 Make research reproducible again - researchobject.org

    Oct 06, 2015 1,817 0

  • 2015-09-18 Open PHACTS architecture

    Sep 17, 2015 2,961 0

  • 2015-07-11 BOSC 2015 Apache Taverna

    Sustaining research software at the Apache Software Foundation

    Jul 07, 2015 1,784 0

  • 2014-10-31 Taverna 3 Architecture

    Oct 29, 2014 2,698 0

  • 2014-10-30 Taverna 3 updates

    Oct 29, 2014 2,269 0

  • Taverna as an Apache Incubator project

    Oct 21, 2014 3,808 0