COMP333

Algorithm Theory and Design

 

 

Daniel Sutantyo

Department of Computing

Macquarie University

Lecture slides adapted from lectures given by Frank Cassez, Mark Dras, and Bernard Mans

Summary

  • Algorithm complexity (running time, recursion tree)
  • Algorithm correctness (induction, loop invariants)
  • Problem solving methods:
    • exhaustive search
    • dynamic programming
    • greedy method
    • divide-and-conquer
    • probabilistic method
    • algorithms involving strings
    • algorithms involving graphs

Summary

  • Exhaustive search:
    • Problems and subproblems, search tree, backtracking
  • Dynamic programming:
    • Optimal substructure
    • Overlapping subproblems
public static int fib(int n) {
  if (n <= 2)
    return 1;
  else return fib(n-1) + fib(n-2);
}

Fibonacci

(the obligatory dynamic programming example)

1, 1, 2, 3, 5, 8, 13, 21, 34, 55, 89, ...

public static int fib(int n) {
  if (n <= 2)
    return 1;
  else return fib(n-1) + fib(n-2);
}

Fibonacci

fib(10)
fib(9)
fib(8)
fib(8)
fib(7)
fib(7)
fib(6)
fib(6)
fib(6)
fib(5)
fib(6)
fib(5)
fib(5)
fib(4)
fib(7)
fib(6)
fib(5)
...
...
...
...

Fibonacci

number recursive calls

public static int fib(int n) {
  if (n <= 2)
    return 1;
  else return fib(n-1) + fib(n-2);
}
n fib(n) no. of recursive calls
10 55 109
20 6,765 13,529
30 832,040 1,664,079
40 102,334,155 204,668,309
50 12,586,269,025 25,172,538,049
60 ??? ???

Fibonacci

top down dynamic programming

(memoisation)

public static long table[] = new long[1000];
public static int fib(int n) {
  if (table[n] != 0)
    return table[n];
  else {
    table[n] = fib2(n-1) + fib2(n-2);
    return table[n];
  }
}

Fibonacci

top down dynamic programming

(tabulation)

fib(10)
fib(9)
fib(8)
fib(8)
fib(7)
fib(6)
fib(6)
fib(5)
fib(7)
...

Fibonacci

bottom-up dynamic programming

public static long fib(int n) {
  long a = 0;
  long b = 1;
  for (int i = 0; i < n; i++) {
    b = a + b;
    a = b - a;
  }
  return a;
}

recursion

top-down

DP

bottom-up

DP

???

Dynamic Programming

dynamic programming vs divide-and-conquer

  • We are going to discuss divide-and-conquer strategy in Week 6
  • However, you should already understand how divide-and-conquer strategy works (from COMP125 and COMP225):
    • Divide the problem into smaller subproblems
    • Conquer the subproblems
    • Combine the solutions to the subproblem into the solution for the original problem

Dynamic Programming

dynamic programming vs divide-and-conquer

  • Questions:
    • is the first version of recursive fibonacci algorithm a divide-and-conquer algorithm?



       
    • is binary search a divide-and-conquer algorithm?
    • is linear search a divide-and-conquer algorithm?
public static int fib(int n) {
  if (n <= 2)
    return 1;
  else return fib(n-1) + fib(n-2);
}

Dynamic Programming

dynamic programming vs divide-and-conquer

fib(n)
fib(n-1)
fib(n-2)
linear_search(0,n)
linear_search(0,0)
linear_search(1,n)
binary_search(0,n)
binary_search(0,n/2)
binary_search(n/2+1,n)

Dynamic Programming

dynamic programming vs divide-and-conquer

fib(n)
fib(n-1)
fib(n-2)
   merge_sort(0,n)
merge_sort(0,n/2)
merge_sort(n/2+1,n)

Dynamic Programming

dynamic programming vs divide-and-conquer

fib(n)
fib(n-1)
fib(n-2)
   m_sort(0,n)
m_sort(0,n/2)
m_sort(n/2+1,n)
fib(n-2)
fib(n-3)
fib(n-3)
fib(n-4)
m_sort(0,n/4)
m_sort(n/4+1,n/2)
m_sort(n/2+1,3n/4)
m_sort(3n/4+1,n)

Dynamic Programming

dynamic programming vs divide-and-conquer

fib(n)
fib(n-1)
fib(n-2)
fib(n-2)
fib(n-3)
fib(n-3)
fib(n-4)
  • Overlapping subproblems: the subproblems share subsubproblems
    • computing this subsubproblem twice (or more) is a waste!

Dynamic Programming

dynamic programming vs divide-and-conquer

  • Dynamic programming is a divide-and-conquer approach
    • think of it as a 'smarter' recursive backtracking
  • The main difference is that some problems have overlapping subproblems
    • if there are overlapping subproblems, we only need to compute said subproblem once and store the result
  • Dynamic programming is typically used to solve optimisation problems and counting problems

Dynamic Programming

optimal substructure

  • For us to be able to use dynamic programming, the problem also needs to exhibit optimal substructure:
    • the optimal solution to the problem can be constructed using optimal solutions to the subproblems
  • Does the fibonacci problem have the optimal substructure property?
    • does the (optimal) solution to the problem contains the (optimal) solution to the subproblem?
    • how do you construct the (optimal) solution to the problem using the (optimal) solutions to the subproblems

Optimal Substructure

We have a bunch of metallic bars with known lengths. Sometimes we need to produce a bar of a certain length from the bars that we have.

We are not allowed to cut up any metallic bar, but we can solder any two bars together to create a longer bar.

  • Example: Given [ 50, 2, 18, 11, 9, 23, 5, 10, 30, 6, 17 ]
    • can we make 27?
    • what is the minimum number of bars that we need?

[ 50, 2, 18, 11, 9, 23, 5, 10, 30, 6, 17 ]   L = 27

[ 2, 18, 11, ..., 17 ]   L = -23

[ 2, 18, 11, ..., 17 ]   L = 27

don't pick 50

pick 50

[18, 11, ... , 17] L = -25

don't pick 2

pick 2

pick 2

don't pick 2

...

...

...

...

...

...

[18, 11, ... , 17] L = -23

[18, 11, ... , 17] L = 25

[18, 11, ... , 17] L = 27

...

...

Optimal Substructure

[ 50, 2, 18, 11, 9, 23, 5, 10, 30, 6, 17 ]   L = 27

[ 2, 18, 11, 9, 23, ..., 17 ]   L = -23

pick 50

[ 50, 18, 11, 9, 23, ..., 17 ]   L = 25

pick 2

[ 50, 2, 11, 9, 23, ..., 17 ]   L = 7

[ 50, 2, 18, 9, 23, ..., 17 ]   L = 16

pick 18

pick 11

[ 50, 2, 18, 11, 9, 23, ..., 6 ]   L = 10

pick 17

pick 9

[ 50, 2, 18, 11, 23, ..., 17 ]   L = 16

...

...

...

Optimal Substructure

subproblems

subproblem:         [ 50, 2, 18, 11, 9, 23, 5, 30, 6, 17 ]   L = 17

optimal solution: 1 number (pick 17)

non-optimal solutions: 2 numbers (pick 11, 6)

pick 2

pick 10

subproblem:         [ 50, 2, 18, 11, 9, 23, 5, 10, 30, 6 ]   L = 25

optimal solution: 3 (pick 11, 9, 5)

problem:         [ 50, 2, 18, 11, 9, 23, 5, 10, 30, 6, 17 ]   L = 27

optimal solution: 2 (pick 17 and 10)

the optimal solution to the problem contains
the optimal solution to the subproblem

...

...

...

Optimal Substructure

subproblems

subproblem:         [ 50, 2, 18, 11, 9, 23, 5, 30, 6, 17 ]   L = 17

optimal solution: 1 number (pick 17)

non-optimal solutions: 2 numbers (pick 11, 6)

problem:         [ 50, 2, 18, 11, 9, 23, 5, 10, 30, 6, 17 ]   L = 27

optimal solution: 2 (pick 17 and 10)

How do you construct the optimal solution to the problem using the optimal solutions of the subproblems?

Optimal substructure (informally): The optimal solution is 1 + the best among the optimal solutions of the subproblems

Optimal Substructure

subproblems

We have a bunch of metallic bars with known lengths. Sometimes we need to produce a bar of a certain length from the bars that we have.

We are not allowed to cut up any metallic bar, but we can solder any two bars together to create a longer bar.

  • Can we use dynamic programming to solve this problem?
    • Yes, you do have overlapping subproblems and optimal substructure
    • However, it may not be worth it

Optimal Substructure

We have metallic bars with known lengths as before, but for each length, you now have an infinite number of bars with that length.

We need to produce a bar of a certain length from the bars that we have. As before, you cannot cut up any metallic bar, but can solder any two bars together to create a longer bar.

  • Example: Given [ 100, 50, 25, 10, 5, 1 ]
    • can we make 374?
    • what is the minimum number of bars that we need?

Optimal Substructure

[ 100, 50, 25, 10, 5, 1 ]   L = 374

pick 100

pick 50

pick 25

pick 10

[ 100, 50, 25, 10, 5, 1 ]   L = 373

pick 1

pick 5

[ 100, 50, 25, 10, 5, 1 ]   L = 274

[ 100, 50, 25, 10, 5, 1 ]   L = 369

[ 100, 50, 25, 10, 5, 1 ]   L = 364

[ 100, 50, 25, 10, 5, 1 ]   L = 349

[ 100, 50, 25, 10, 5, 1 ]   L = 324

Optimal Substructure

[ 100, 50, 25, 10, 5, 1 ]   L = 374

pick 100

pick 50

pick 25

pick 10

[ 100, 50, 25, 10, 5, 1 ]   L = 373

pick 1

pick 5

[ 100, 50, 25, 10, 5, 1 ]   L = 274

[ 100, 50, 25, 10, 5, 1 ]   L = 369

[ 100, 50, 25, 10, 5, 1 ]   L = 364

[ 100, 50, 25, 10, 5, 1 ]   L = 349

[ 100, 50, 25, 10, 5, 1 ]   L = 324

Do you have overlapping subproblems?

Optimal Substructure

[ 100, 50, 25, 10, 5, 1 ]   L = 374

Do you have overlapping subproblems?

Pick 100     :      subproblem [ 100, 50, 25, 10, 5, 1 ]   L = 274

Pick 50 twice     :      subproblem [ 100, 50, 25, 10, 5, 1 ]   L = 274

Pick 25 four times     :      subproblem [ 100, 50, 25, 10, 5, 1 ]   L = 274

Pick 1, 1, 1, 1, 1, 5, 5, 5, 5, 25, 25,  5, 5, 5, 5, then pick 5     :     

                                                           subproblem [ 100, 50, 25, 10, 5, 1 ]   L = 274

Optimal Substructure

[ 100, 50, 25, 10, 5, 1 ]   L = 374

pick 100

pick 50

pick 25

pick 10

[ 100, 50, 25, 10, 5, 1 ]   L = 373

pick 1

pick 5

[ 100, 50, 25, 10, 5, 1 ]   L = 274

[ 100, 50, 25, 10, 5, 1 ]   L = 369

[ 100, 50, 25, 10, 5, 1 ]   L = 364

[ 100, 50, 25, 10, 5, 1 ]   L = 349

[ 100, 50, 25, 10, 5, 1 ]   L = 324

Do you have optimal substructure?

Optimal Substructure

[ 100, 50, 25, 10, 5, 1 ]   L = 374

pick 100

pick 50

pick 25

pick 10

[ 100, 50, 25, 10, 5, 1 ]   L = 373

pick 1

pick 5

[ 100, 50, 25, 10, 5, 1 ]   L = 274

[ 100, 50, 25, 10, 5, 1 ]   L = 369

[ 100, 50, 25, 10, 5, 1 ]   L = 364

[ 100, 50, 25, 10, 5, 1 ]   L = 349

[ 100, 50, 25, 10, 5, 1 ]   L = 324

Optimal Substructure

How do you construct the optimal solution to the problem using the optimal solutions of the subproblems?

Optimal substructure (informally): the optimal solution is 1 + the best among the optimal solutions of the subproblems

  • Do problems always have optimal substructure property?
    • Shortest path (Dijkstra)
    • Minimum spanning tree
  • What about the hard problems?
    • Knapsack?
    • Travelling salesman?
    • Minimum vertex cover?

Optimal Substructure

  • Travelling salesman: find the shortest route to visit every city and then return to the origin city 
    • Let \(A\) be the starting city
    • Problem:     \(A \rightarrow \text{(every other city)} \rightarrow A\)
    • Subproblem:
      • \(A \rightarrow B\)
      • \(B \rightarrow \text{(every other city)} \rightarrow A\)
  • ​Does this mean you can use dynamic programming to solve the travelling salesman problem?

Optimal Substructure

problems with optimal substructure

  • ​Does this mean you can use dynamic programming to solve the travelling salesman problem EFFICIENTLY?

Optimal Substructure

problems with optimal substructure

  • ​Does this mean you can use dynamic programming to solve the travelling salesman problem EFFICIENTLY?
  • Longest path problem
    • find the longest path between two vertices without visiting any vertices twice

5

4

1

3

2

Optimal Substructure

problems without optimal substructure

  • Longest path problem
    • what is the longest path between 1 and 5?
    • does it has optimal substructure?

5

4

1

3

2

Optimal Substructure

problems without optimal substructure

  • Subproblems of longest path between 1 and 5:
    • what is the longest path between 1 and 3?
    • what is the longest path between 3 and 5?

5

4

1

3

5

1

3

2

Optimal Substructure

problems without optimal substructure

  • Why does it matter to have an optimal substructure?
    • We want to find an optimal solution to a problem
    • We want to break down our problem into smaller subproblems (because it is easier to do smaller problems, and there can be overlaps)
    • We want to apply the SAME algorithm to the subproblem (this means we will also get the optimal solution to that subproblem)

Optimal Substructure

why does it matter

  • If the optimal solution to the subproblem does not help in finding the optimal solution to the problem, then you cannot recursively perform divide-and-conquer

Optimal Substructure

why does it matter

Dynamic Programming

can we solve it?

  • Does the problem have overlapping subproblems?
     
  • Does the problem have the optimal substructure property?
     
  • If the answer to these two questions is yes, then we can use dynamic programming to solve the problem

Dynamic Programming

developing a DP algorithm

  • In developing a dynamic-programming solution, we follow a sequence of four steps (from CLRS, page 359)
    1. Characterise the structure of an optimal solution
    2. Recursively define the value of an optimal solution
    3. Compute the value of an optimal solution
    4. (optional) Construct an optimal solution from computed information

Dynamic Programming

developing a DP algorithm

  • Informally:
    1. Show that there is an optimal substructure
    2. Show the recursive relation that gives optimal solution
    3. Compute the value of an optimal solution
    4. (optional) Construct an optimal solution from computed information

Rod Cutting

  • We have one piece of rod that we can cut into smaller pieces. Suppose that cutting a rod is free and we can sell a rod of length \(i\) for \(p_i\). Given a rod of length \(n\), how should we cut it up to maximise our revenue?

\(i\)

\(p_i\)

1     2     3     4     5     6     7     8     9     10

1     5     8     9    10   17   17   20   24    30

\(i\)

\(p_i\)

1     2     3     4     5     6     7     8     9     10

1     5     8     9    10   17   17   20   24    30

Rod Cutting

Rod Cutting

brute force

4

1+3

2+2

1+1+2

3+1

1+2+1

2+1+1

1+1+1+1

Rod Cutting

brute force

5,

4+1,            3+2,              2+3,             1+4

3+1+1,        1+3+1,         1+1+3,         2+2+1,         2+1+2,         1+2+2

1+1+1+2,    1+1+2+1,    1+2+1+1,     2+1+1+1

1+1+1+1+1

Rod Cutting

brute force

  • no cut: \(\binom{4}{0}\) = 1 way
  • cut in 1 place: \(4 \choose 1\)  = 4 ways
  • cut in 1 place: \(4 \choose 2\)  = 6 ways
  • cut in 1 place: \(4 \choose 3\)  = 4 ways
  • cut in 1 place: \(4 \choose 4\)  = 1 way

\(c_1\)

\(c_2\)

\(c_3\)

\(c_4\)

Rod Cutting

brute force

  • If n = 5, you have 4 possible places to cut
  • In total, there are \(2^{n-1}\) possible combinations
    • hence the brute-force approach is \(O(2^n)\)

\(c_1\)

\(c_2\)

\(c_3\)

\(c_4\)

Rod Cutting

overlapping subproblems

  • Once we make a cut, we have a smaller problem of the same type, but with smaller \(n\)
  • Can you spot the overlapping subproblems?

Rod Cutting

overlapping subproblems

Rod Cutting

overlapping subproblems

  • Rule: after each cut, don't cut the left part any further 
  • Is this still brute force?

Rod Cutting

optimal substructure

  • Does the problem exhibit optimal substructure?
  • You have to show that the optimal solution to the problem contains the optimal solutions to the subproblems

Rod Cutting

Step 1: show that there is an optimal substructure

  • To solve the problem, you have to make a choice

Rod Cutting

Step 1: show that there is an optimal substructure

  • The choice you make results in more subproblems

Rod Cutting

Step 1: show that there is an optimal substructure

  • Imagine that you have the optimal solution the problem by picking one path (i.e. you know which subproblem to do next)
    • you already have the optimal solution, so obviously you have the solution to the subproblem
    • is the solution to the subproblem optimal?

Rod Cutting

Step 1: show that there is an optimal substructure

  • Suppose that you have the optimal solution to the problem of cutting a rod of length \(n\)
  • Suppose that this optimal solution requires you to cut the rod into two pieces, of length \(r\) and \((n-r)\)
    • this means you have the subproblem of cutting a rod of length \((n-r)\) 
    • the solution to this subproblem must be optimal
    • why? 

Rod Cutting

Step 1: show that there is an optimal substructure

  • Suppose that the solution to the subproblem of cutting a rod of length \((n-r)\) gives you \(y\) dollars
  • Suppose that the optimal solution to the problem of cutting a rod of length \(n\) gives you \((x+y)\) dollars

$10

$1 + $8

$8 + $1

$9+$0

$10

Rod Cutting

Step 1: show that there is an optimal substructure

  • If the solution to the subproblem is NOT optimal, then you would be able to find a better solution that gives you \(z > y\) dollars
    • but this means the optimal solution to the problem is \((x + z)\) dollars, not \((x+y)\) dollars

$11

$1 + $8

$8 + $1

$9+$0

$11

Rod Cutting

Step 1: show that there is an optimal substructure

  • Therefore, for the rod cutting problem, the optimal solution to the problem must contain the optimal solution to the subproblem
    • It has the optimal substructure property!
  • To show the existence of optimal substructure, you always follow the same steps
    1. Show that the optimal solution requires you to solve one or more subproblems and assume that you have the optimal solution 
    2. You argue that the solution to the subproblems must also be optimal
      • otherwise, you can construct a better solution for the problem using cut-and-paste technique
      • but this is a contradiction: we assumed we have the optimal solution!

Optimal Substructure

showing optimal substructure

 

  • Cut-and-paste technique:
    • cut the non-optimal solution and paste in the optimal solution
  • Refer to CLRS page 379 if you want a more detailed breakdown of these steps

Optimal Substructure

showing optimal substructure

Rod Cutting

Step 2: show the recursive relation that gives optimal solution

  • We have shown that the rod cutting problem has an optimal substructure
  • How do we choose which subproblem gives you the optimal answer?

Rod Cutting

Step 2: show the recursive relation that gives optimal solution

  • Let \(p_i\) be the price of a rod of length \(i\), \(1 \le i \le n\)
    • \(p_n\) is the price of the whole rod (i.e. don't make any cut)
  • Let \(r_i\) be the maximum revenue that we can obtain from a rod of length \(i\), \(1 \le i \le n\)

Rod Cutting

Step 2: show the recursive relation that gives optimal solution

  • The possible revenues for cutting a rod of length \(n\) are:
    • \(p_n\)                       
    • \(p_{n-1} + r_1\)    
    • \(p_{n-2} + r_2 \)
    • ...
    • \(p_2+r_{n-2}\)
    • \(p_1+r_{n-1}\)
  • All cases except for the first one creates an additional subproblem

Rod Cutting

Step 2: show the recursive relation that gives optimal solution

  • The recursive relation for the rod cutting problem is


     
  • i.e. go through all the subproblems, and find one that will maximise the revenue
  • now you know how to code this!

\[r_n = \max_{1\le i \le n} (p_i + r_{n-i}) \]

Rod Cutting

Step 3: compute the value of an optimal solution

\[r_n = \max_{1\le i \le n} (p_i + r_{n-i}) \]

// assume p[i] gives price of rod of length i

public static int cut(int n) {
  if (n == 0)
    return 0;
  int answer = Integer.MIN_VALUE;
  for (int i = 1; i <= n; i++) {
    answer = Math.max(answer, p[i] + cut(n-i));
  }
  return answer;
}

Rod Cutting

Step 3: compute the value of an optimal solution

static int[] p  = {0, 1,  5,  8,  9, 10, 17, 17, 20, 24, 30,
		     33, 36, 40, 42, 45, 50, 52, 58, 58, 60,
		     62, 65, 66, 72, 80, 82, 83, 85, 87, 88};

public static int cut(int n) {
  if (n == 0)
    return 0;
  int answer = Integer.MIN_VALUE;
  for (int i = 1; i <= n; i++) {
    answer = Math.max(answer, p[i] + cut(n-i));
  }
  return answer;
}
n optimal answer no. of recursive calls
10 30 1,024
15 45 33,792
20 63 1,082,368
25 80 34,636,800
30 94 1,108,378,624
static int[] p  = {0, 1,  5,  8,  9, 10, 17, 17, 20, 24, 30,
		     33, 36, 40, 42, 45, 50, 52, 58, 58, 60,
		     62, 65, 66, 72, 80, 82, 83, 85, 87, 88};

public static int cut(int n) {
  if (n == 0)
    return 0;
  int answer = Integer.MIN_VALUE;
  for (int i = 1; i <= n; i++) {
    answer = Math.max(answer, p[i] + cut(n-i));
  }
  return answer;
}
public static int cut(int n) {
  if (r[n] != 0) return r[n]; // memoise
  if (n == 0)
    return 0;
  int answer = Integer.MIN_VALUE;
  for (int i = 1; i <= n; i++) {
    answer = Math.max(answer, p[i] + cut(n-i));
  }
  return r[n] = answer; // store the result
}

Rod Cutting

Step 3: compute the value of an optimal solution

public static int cut(int n) {
  if (r[n] != 0) return r[n]; // memoise
  if (n == 0)
    return 0;
  int answer = Integer.MIN_VALUE;
  for (int i = 1; i <= n; i++) {
    answer = Math.max(answer, p[i] + cut(n-i));
  }
  return r[n] = answer; // store the result
}
n optimal answer no. of recursive calls
10 30 56
15 45 122
20 63 213
25 80 329
30 94 470

recursion

top-down

DP

bottom-up

DP

???

Rod Cutting

Step 3: compute the value of an optimal solution

public static int cut_bottom_up(int n) {
  r[0] = 0;
  for (int j = 1; j <= n; j++) {
    int answer = Integer.MIN_VALUE;
    for (int i = 1; i <= j; i++) {
      answer = Math.max(answer, p[i] + r[j-i]);
    }
    r[j] = answer;
  }
  return r[n];
}

Rod Cutting

Step 3: compute the value of an optimal solution

public static int cut_bottom_up(int n) {
  r[0] = 0;
  for (int j = 1; j <= n; j++) {
    int answer = Integer.MIN_VALUE;
    for (int i = 1; i <= j; i++) {
      answer = Math.max(answer, p[i] + r[j-i]);
    }
    r[j] = answer;
  }
  return r[n];
}
  • To compute \(r_n\), we need \(r_1\), \(r_2\), \(\dots\), \(r_{n-1}\)
  • Compute \(r_j\) for \(j = 1, 2, \dots, n\)
    • \(r_1 = p_1\)
    • \(r_2 = \max\{p_2,p_1+r_1\}\)
    • \(r_3 = \max\{p_3,p_2+r_1,p_1+r_2\}\)

Rod Cutting

Step 4: construct an optimal solution from computed information

public static int cut_bottom_up(int n) {
  r[0] = 0;
  for (int j = 1; j <= n; j++) {
    int answer = Integer.MIN_VALUE;
    for (int i = 1; i <= j; i++) {
      if (answer < p[i] + r[j-i]) {
	answer = p[i] + r[j-i];
	s[j] = i;
      }
    }
    r[j] = answer;
  }
  return r[n];
}
  • Create an array \(s\) where \(s[j]\) holds the optimal size of the first piece (i.e. the piece that you do not cut any further) when solving a subproblem of size \(j\)

Rod Cutting

Step 4: construct an optimal solution from computed information

\(i\)

\(p_i\)

1     2     3     4     5     6     7     8     9     10

1     5     8     9    10   17   17   20   24    30

\(s_i\)

1      2     3     2     2     6     1    2     3     10

  • For \(i = 10\), the optimal cut is 10 and 0
    • optimal solution is 30, just use 10
  • For \(i = 9\), the optimal cut is 3 and 6
    • For \(i = 6\), the optimal cut is 6 and 0
    • optimal solution is 3 and 6

Rod Cutting

Step 4: construct an optimal solution from computed information

\(i\)

\(p_i\)

1     2     3     4     5     6     7     8     9     10

1     5     8     9    10   17   17   20   24    30

\(s_i\)

1      2     3     2     2     6     1    2     3     10

public static String construct_solution(int n) {
  String ans = "";
  while (n > 0) {
    ans = ans + s[n] + " ";
    n = n - s[n];
  }
  return ans;
}

Rod Cutting

Step 4: construct an optimal solution from computed information

static int[] p  = {0, 1,  5,  8,  9, 10,    17, 17, 20, 24, 30,

		     33, 36, 40, 42, 45,    50, 52, 58, 58, 60,

		     62, 65, 66, 72, 80,    82, 83, 85, 87, 88};
n optimal answer optimal cuts
10 30 10
15 45 2 and 13
20 63 2 and 18
25 80 25
30 94 12 and 18

Rod Cutting

final words

  • Bottom-up dynamic programming solution can be difficult to construct
  • In this lecture, you are not learning how to write a code to a DP problem
  • You are learning how to recognise the situation when you can apply the DP method:
    • find optimal substructure and overlapping subproblems
    • find the recursive relationship to find the optimal answer

Longest Common Subsequence

definition

  • Given two sequences \(X\) and \(Y\), find the longest common subsequence of \(X\) and \(Y\)
    • example from CLRS 15.4 (page 390)​
    • e.g. \(X = \{ A,B,C,B,D,A,B \}\)
             \(Y = \{ B,D,C,A,B,A \} \)
             the sequence \(\{ B,D,A,B \}\) and \(\{ B,C,B,A \}\) are two
             possible solutions
  • What is the brute-force solution?
  • Example:
    • \(X = \{ A,B,C,B,D,A,B \}\)
    • \(Y = \{ B,D,C,A,B,A \} \)
  • Brute force solution:
    • Generate all subsequences of \(X\) 
    • Generate all subsequence of \(Y\)
    • For each subsequence of \(X\), compare it with a subsequence of \(Y\)
    • \(O(2^n)\) where \(n\) is the total length of the sequences \(X\) and \(Y\)

Longest Common Subsequence

brute force

  • Example:
    • \(X = \{ A,B,C,B,D,A,B \}\)
    • \(Y = \{ B,D,C,A,B,A \} \)
  • Can you improve the brute force approach?
    • do you need to compare all these?
      • A,B,C,B with B,D,C
      • A,B,C,B with B,D
      • A,B,C,B with D,C
      • A,B,C,B with B,C

Longest Common Subsequence

brute force

  • Example:
    • \(X = \{ A,B,C,B,D,A,B \}\)
    • \(Y = \{ B,D,C,A,B,A \} \)
  • Let's get some intuition:
    • A,B,C,B with B,D,C
    • A,B,C,B with B,D
    • A,B,C,B with D,C
    • A,B,C,B with B,C
  • Intution 1: Why do we keep on comparing A? Can we drop it?

Longest Common Subsequence

brute force

  • Example:
    • \(X = \{ A,B,C,B,D,A,B \}\)
    • \(Y = \{ B,D,C,A,B,A \} \)
  • Let's get some intuition:
    • A,B,C,B with B,D,C
    • A,B,C,B with B,D
    • A,B,C,B with D,C
    • A,B,C,B with B,C
  • Intuition 2: Why do we keep on comparing B? Can we drop it?

Longest Common Subsequence

brute force

  • Example:
    • \(X = \{ A,B,C,B,D,A,B \}\)
    • \(Y = \{ B,D,C,A,B,A \} \)
  • Is there some sort of structure that we can exploit?
  • Optimal substructure:
    • does the longest common subsequence problem have an optimal substructure?

Longest Common Subsequence

brute force

  • \(X = \{ x_1, x_2, x_3, \dots, x_m \} \)
  • \(Y = \{ y_1, y_2, y_3, \dots, y_n \} \)
  • Let \(Z = \{ z_1, z_2, z_3, \dots, z_k \} \) be the LCSS of \(X\) and \(Y\)
  • If \(x_1 = y_1\), then Z should contain \(x_1 = y_1\), i.e. \(z_1 = x_1 = y_1\), and \(Z_2 = \{z_2,z_3,\dots,z_k\}\) is the LCSS of \(X_2\) and \(Y_2\)

Case A:

Case B:

Longest Common Subsequence

optimal substructure

  • If \(x_1 \ne y_1\), then Z is either
    • the LCSS of \(X_2 =\{x_2,x_3,\dots,x_m\}\), and \(Y=\{y_1,y_2,\dots,y_n\}\), or
    • the LCSS of \(X = \{x_1,x_2,\dots,x_m\}\) and \(Y_2 =\{y_2,y_3,\dots,y_n\}\)

Longest Common Subsequence

optimal substructure

A B C B D A B

B D C A B A

B C B D A B

B D C A B A

A B C B D A B

D C A B A

  • If \(x_1 \ne y_1\), then Z is either
    • the LCSS of \(X_2 =\{x_2,x_3,\dots,x_m\}\), and \(Y=\{y_1,y_2,\dots,y_n\}\), or
    • the LCSS of \(X = \{x_1,x_2,\dots,x_m\}\) and \(Y_2 =\{y_2,y_3,\dots,y_n\}\)

Case A:

Longest Common Subsequence

optimal substructure

Proof (by contradiction):

  • \(Z\) is the LCSS of \(X\) and \(Y.\)
  • If Z is NOT the LCSS of \(X_2\) and \(Y\), that means they have a longer common subsequence than \(Z\), say \(Z^*\).
  • This means \(Z^*\) is the LCSS of \(X\) and \(Y\), a contradiction!
  • Proof is symmetrical for the case \(X\) and \(Y_2\)
  • If \(x_1 \ne y_1\), then Z is either
    • the LCSS of \(X_2 =\{x_2,x_3,\dots,x_m\}\), and \(Y=\{y_1,y_2,\dots,y_n\}\), or
    • the LCSS of \(X = \{x_1,x_2,\dots,x_m\}\) and \(Y_2 =\{y_2,y_3,\dots,y_n\}\)

Case A:

Longest Common Subsequence

optimal substructure

B C B D A B

B D C A B A

C B D A B

B D C A B A

B C B D A B

D C A B A

Case B:

C B D A B

D C A B A

  • If \(x_1 = y_1\), then Z should contain \(x_1 = y_1\), i.e. \(z_1 = x_1 = y_1\), and \(Z_2 = \{z_2,z_3,\dots,z_k\}\) is the LCSS of \(X_2\) and \(Y_2\)

Longest Common Subsequence

optimal substructure

Case B:

Proof (by contradiction):

  • if \(Z\) does not contain \(x_1\), then we can always append \(x_1\) to it, making a longer common subsequence
  • if \(Z_2\) is not the LCSS of \(X_2\) and \(Y_2\), then there is another common subsequence \(Z^*\) that is longer. If we append \(x_1\) to \(Z^*\), \(Z^*\) would be longer than \(Z\), a contradiction!
  • If \(x_1 = y_1\), then Z should contain \(x_1 = y_1\), i.e. \(z_1 = x_1 = y_1\), and \(Z_2 = \{z_2,z_3,\dots,z_k\}\) is the LCSS of \(X_2\) and \(Y_2\)

Longest Common Subsequence

recursive relation

\(x_1\ x_2\ x_3 \dots x_m\)

\(y_1\ y_2\ y_3\dots y_n\)

\(x_2\ x_3 \dots x_m\)

\(y_1\ y_2\ y_3\dots y_n\)

\(x_1\ x_2\ x_3 \dots x_m\)

\(y_2\ y_3\dots y_n\)

\(x_2\ x_3 \dots x_m\)

\(y_2\ y_3\dots y_n\)

\(x_1 = y_1\)

\(x_1 \ne y_1\)

\(x_1 \ne y_1\)

Longest Common Subsequence

recursive relation

\[ \text{LCSS}(X,Y) = \begin{cases} 0 & \text{if \(X\) or \(Y\) is empty}\\1 + \text{LCSS}(X_2,Y_2) & \text{if $x_1 = y_1$}\\\max\left(\text{LCSS}(X_2,Y_1),\text{LCSS}(X_1,Y_2)\right) & \text{if $x_1 \ne y_2$}\end{cases} \] 

\(x_1\ x_2\ x_3 \dots x_m\)

\(y_1\ y_2\ y_3\dots y_n\)

\(x_2\ x_3 \dots x_m\)

\(y_1\ y_2\ y_3\dots y_n\)

\(x_1\ x_2\ x_3 \dots x_m\)

\(y_2\ y_3\dots y_n\)

\(x_2\ x_3 \dots x_m\)

\(y_2\ y_3\dots y_n\)

\(x_1 = y_1\)

\(x_1 \ne y_1\)

\(x_1 \ne y_1\)

Longest Common Subsequence

top-down solution

public static int lcss_top_down(String x, String y) {
  int i = x.length()-1, j = y.length()-1;
  if (x.length() == 0 || y.length() == 0)
	return 0;
  if (lcss[i][j] != -1) 
	return lcss[i][j];
  else if (x.charAt(0) == y.charAt(0))
	return lcss[i][j] = i=1 + lcss_top_down(x.substring(1),y.substring(1));
  else 
	return lcss[i][j] = Math.max(lcss_top_down(x.substring(1),y), lcss_top_down(x,y.substring(1)));
}

Longest Common Subsequence

bottom-up solution

for (int i = 0; i < n+1; i++) lcss[m][i] = 0;
for (int i = 0; i < m+1; i++) lcss[i][n] = 0;
		
for (int i = m-1; i > -1; i--){
  for (int j = n-1; j > -1; j--){
    // if character matches, then go diagonally 
    if(a.charAt(i) == b.charAt(j))
      lcss[i][j] = 1 + lcss[i+1][j+1];
    // else, compare the cell to your right and to your bottom, 
    // and pick the larger one
    else
      lcss[i][j] = Integer.max(lcss[i][j+1], lcss[i+1][j]);
  }
}

COMP333 Algorithm Theory and Design - W4 2019 - Dynamic Programming

By Daniel Sutantyo

COMP333 Algorithm Theory and Design - W4 2019 - Dynamic Programming

Lecture notes for Week 4 of COMP333, 2019, Macquarie University

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