Daniel Haehn PRO
Hi, I am a biomedical imaging and visualization researcher who investigates how computational methods can accelerate biological and medical research.
Hack NiiVue.js! 2023
MACHINE
PSYCHOLOGY
DANIELHAEHN.COM
Biomedical Imaging
Chart Question Answering
Loraine Franke
Mahsa Geshvadi
Jenna Kim
Ryan Zurrin
Edward Gaibor
Kiran Sandilya Balivada
MACHINE
PSYCHOLOGY
5x PhD Students
2x MS, 2x UGrad Students
SangHyuk Kim
Vidhya Narayanappa
Shruti Varade
We
Computers
GONZO
MONSTER
VAMPIRE
ZOMBIE
GARGOYLE
2x NVIDIA DGX A100
10 years ago..
In 2022: 6k users / 10k sessions
Single-click Interaction
CACTAS-Tool
Jae Song
Jenna Kim
Lilla Zollei
Segment Anything
develop a processing module...
...that works with many different visualization frameworks
script = document.createElement("script");
script.type = "text/javascript";
script.src = "https://boostlet.org/dist/boostlet.min.js";
script.onload = run;
document.head.appendChild(script);
eval(script);
function run() {
// detect visualization framework
Boostlet.init();
image = Boostlet.get_image();
kernel = [
-1, 0, 1,
-2, 0, 2,
-1, 0, 1
];
filtered = Boostlet.filter(image.data, image.width, image.height, kernel);
Boostlet.set_image( filtered );
}
Edward Gaibor
Details: bit.ly/frameworksOverview
nv.get_volume_data ( x1, x2, y1, y2, z1, z2 )
maybe?
endless processing possibilities :)
nv.set_volume_data ( x1, x2, y1, y2, z1, z2, new data )
nv.set_label_data ( x1, x2, y1, y2, z1, z2, new data )
nv.get_label_data ( x1, x2, y1, y2, z1, z2 )
Goal: Nobrainer models as Boostlet!
Satra Ghosh's Senseable Intelligence Group
ROI Selection
Shruti Varade
all different!
soon in Boostlet.js!
MACHINE
PSYCHOLOGY
DANIELHAEHN.COM
Thank you!
Hack NiiVue.js!
By Daniel Haehn
Hack NiiVue.js!
Machine Psychology at UMass Boston. See https://mpsych.org!
