Reproducibility; Research Objects (RO-Crate) and Common Workflow Language (CWL)

 

Stian Soiland-Reyes

eScience lab, The University of Manchester

INDElab, University of Amsterdam

WoSSS21: Workshop on
Sustainable Software Sustainability
2021-10-07

H2020-INFRAEOSC-2018-2 824087

H2020-INFRAEDI-2018-1 823830

H2020-INFRAIA-2017-1 730976

H2020-INFRADEV-2019-2 871118

H2020-INFRAIA-2018-1 823827

Use case:
HPC simulation Workflow
using building blocks

Making Canonical Workflow Building Blocks interoperable across workflow languages

RO-Crate for
workflow descriptions

Describing workflows
with RO-Crate

Containers

Describe workflow

Tests

Registry

Workflows

Authors and contributors

Credit: Marco La Rosa, Peter Sefton

Making your own RO-Crate with Describo

FAIR is not just machine-readable!

RO-Crate for
computational tools

RO-Crate Community is open for anyone to join us!

https://www.researchobject.org/ro-crate/community

RO-Crate next steps

More documentation

  • 5 minute intro
  • Tutorial / training material (Carpentries-style)
  • Showcases of use

Ongoing:

  • CS3mesh4EOSC (Describo Online w/ cloud storage)
  • EOSC-Life (Life Science workflows)
  • BY-COVID (COVID-19 )
  • SYNTHESYS+/DiSSCO (FAIR Digital Objects to digitize museum collections)
  • GA4GH & ELIXIR Cloud (workflow execution)

Next round (proposals and collaborations):

  • Workflows as FAIR Digital Objects
  • Digital Twins in Biodiversity
  • Minimal metadata standards for Semantic Interoperability
  • Cross-repository integrations

Future directions

2021-10-07 Reproducibility; Research Objects (RO-Crate) and Common Workflow Language (CWL) v2

By Stian Soiland-Reyes

2021-10-07 Reproducibility; Research Objects (RO-Crate) and Common Workflow Language (CWL) v2

A retake on previous slides

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