EvoRepo

Evolution of repository

Infrastructure

EvoRepo

Core

elasticluster

- name: Install EvoRepo API
  hosts: frontend*
  sudo: false
  vars:
    anaconda_dir: "~{{ansible_user_id}}/anaconda"

  tasks:
    - name: Get Miniconda install script
      get_url:
        url: http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh
        dest: /tmp/Miniconda-latest-Linux-x86_64.sh

    - name: Install Miniconda
      shell: "bash /tmp/Miniconda-latest-Linux-x86_64.sh -b -p {{anaconda_dir}}"
      args:
        creates: "{{anaconda_dir}}/bin/conda"

    - name: Install bcbio_vm
      shell: "{{anaconda_dir}}/bin/conda install --yes evorepo --channels evorepo"

#!/bin/bash -l
#SBATCH --job-name=compute-repo
#SBATCH --output=slurm.out
#SBATCH --error=slurm.err
#SBATCH --partition=evorepo

evorepo compute-repo openstack

#!/bin/bash -l
#SBATCH --job-name=sparqk-query
#SBATCH --output=slurm.out
#SBATCH --error=slurm.err
#SBATCH --partition=query

evorepo sparql-worker run query-1337

EvoRepo

IaaS

Jarvis

Just a rather very intelligent system

Jarvis SDK

import jarvis

class BadContributor(object):

    def __init__(self, name):
        self._supervisor = jarvis.Supervisor()
        self._supervisor.start()
       
        self._name = name
        self._contribuitor = None

    @property   
    def contribuitor(self):
        if not self._contribuitor:
            self._contribuitor = jarvis.Contribuitor(id=name)
        return self._contribuitor
    
    def work(self):
        for repo in jarvis.Repository(contribuitor=self._contribuitor):
            changes = jarvis.async_changes(contribuitor=alex, repo=repo)
            self._supervisor.bind(changes.on_change, self._process_change)