Daniel Himmelstein
Head of Data Integration at Related Sciences. Digital craftsman of the biodata revolution.
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Integrating All Biomedical Knowledge to Systematically Find the Best Opportunities: From Hetionet to Related Sciences
Presented on 2023-10-03 to the Data-Driven Drug Repurposing Workshop at CZI headquarters in Redwood City, CA. Hosted by EveryCure and the Chan Zuckerberg Initiative.
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Metapath-based approaches for therapeutic crosspurposing and the challenge of degree/study bias
Presentation as part of the CZI / Every Cure Data-Driven Drug Repurposing Virtual Workshop Series on 2024-02-12 with a session title: "deep dive into the challenges and potential applications of knowledge graphs." This presentation is released under a CC BY 4.0 License.
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Dartmouth Libraries Research Facilitation Lightning Talks on 2025-11-20
https://www.library.dartmouth.edu/about-us/dartmouth-libraries/departments/research-facilitation
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Classifying EFO/MONDO diseases as low, medium, or high precision using nxontology-ml
https://github.com/related-sciences/nxontology-ml/issues/13
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VinUni: How to Become a Modern Open Scientist
Presentation by Daniel Himmelstein at VinUniversity in Hanoi, Vietnam. This presentation is released under a CC BY 4.0 License.
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CZI Workshop Lightning Talk on Manubot: Empowering scholars with a personal preprint server & platform for open scholarly writing.
Presentation by Daniel Himmelstein at the Chan Zuckerberg Biohub on 2019-12-04 for the CZI event titled "Preprints I/O: Strengthening the open science ecosystem by extending preprints". This presentation is released under a CC BY 4.0 License.
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Rocky 2019: Hetnet connectivity search provides rapid insights into how two biomedical entities are related
Presentation by Daniel Himmelstein at Rocky Bioinformatics Conference on 2019-11-13. This presentation is released under a CC BY 4.0 License.
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Next generation scholarly communication: advancing the conversation
Presentation by Daniel Himmelstein at Penn Libraries' panel on Open Science on 2019-10-23 for the event titled "#OPENSCIENCE: The Impact of Scientific Research through Open Resources". This presentation is released under a CC BY 4.0 License.
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Frankfurt Book Fair HighWire Panel: Science as conversation
Presentation by Daniel Himmelstein at HighWire's panel on preprints at the Frankfurt Book Faire on 2019-10-16. This presentation is released under a CC BY 4.0 License.
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Philly DevFest: Using a graph database to Integrate biomedical knowledge and predict drug efficacy
Presentation by Daniel Himmelstein at GDG Cloud DevFest Philly on 2019-09-28. This presentation is released under a CC BY 4.0 License.
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BGS Orientation: Electronic Lab Notebooks: special considerations for computational research
Presentation by Daniel Himmelstein on 2019-08-22 as part of the electronic lab notebook orientation module for the Biomedical Graduate Studies program at University of Pennsylvania. This presentation is released under a CC BY 4.0 License.
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Encoding 50 years of biomedical knowledge into a network to predict when a drug treats a disease
Presentation by Daniel Himmelstein at the Huntsman Cancer Institute of University of Utah on 2019-07-16. This presentation is released under a CC BY 4.0 License. Recording available at https://medicine.utah.edu/dbmi/academics-education/decart/video.php?video=0_bs9x2fww
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Highwire Event: The future of scholarly publication: automated, transparent, and open
Presentation by Daniel Himmelstein at HighWire's London Lunch & Learn session on 2019-06-14. This presentation is released under a CC BY 4.0 License. A recording is available at https://vimeo.com/344994584.
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Oxford: Heterogeneous networks to integrate biomedical knowledge and predicting new uses for existing drugs
Presentation on 2019-02-27 at Oxford University. This presentation is released under a CC BY 4.0 License.
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R2R 2019 workshop: Citation by persistent identifiers
Introduction slides for the citation-by-identifier workshop at the 2019 Researcher to Reader conference in London. These slides are released under a CC BY 4.0 License.
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PSB 2019: Writing bio-computational manuscripts with Manubot
Special Working Group in Hawaii at the Pacific Symposium on Biocomputing on 2019-01-04. This presentation is released under a CC BY 4.0 License.
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AI Therapeutics: hetnets for drug repurposing
Presentation on 2018-12-20 at AI Therapeutics in Guilford Connecticut. This presentation is released under a CC BY 4.0 License.
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FORCE2018: Revolutionizing scholarly writing with Manubot
Presentation at FORCE2018 in Montreal on 2018-10-12. This presentation is released under a CC BY 4.0 License. An archive of the slides is available at https://doi.org/10.5281/zenodo.1460985. The recording is available at https://youtu.be/sGL0osdby0U and https://busy.org/@dhimmel/opdk4gax.
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Sci-Hub and the future of publishing: Library Science Talk in Switzerland
Slides for two presentations in Switzerland: 2018-06-25 in Geneva & 2018-06-26 in Zurich. Released under a CC-BY 4.0 License. The recording of the Zurich presentation is online at https://youtu.be/ph04SNZkT4Q and https://d.tube/#!/v/dhimmel/68uly2sj. The Geneva recording is at https://youtu.be/A-unQh2t7rI.
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The hetnet awakens in Mississippi for MCBIOS 2018
Presentation on 2018-03-30 at MCBIOS 2018. This presentation is released under a CC BY 4.0 License.