NAMD
competition
Install
Version
mvapich2 with icc CUDA flag -Ofast mvapich2 with icc CUDA
mvapich2 with gcc CUDA openmpi icc no CUDA
infinband precompile-TCP
precompile-mulicore-CUDA precompile-ibverbs-smp-CUDA
Problem
ldd
ldd
Solution
Use absolute path to run instead of bashrc
Others
-
notes
-
./build --help
-
./config --help
Strategy
Run all test first
Record remaining time
-
Testcase 1 : 18 min
-
Testcase2 : 42 min
-
Testcase 3 : 82 min
-
Testcase 4 : 21 min
-
Testcase 5 : 24 min
-
Testcase 6 : more than 90 min
-
Competition time 180 min
Miss
-
Time left 94 min
-
Remaining time 1.39 hour
-
1 hour and 39 min = 99 min
./ V.S ~/
poseidon01 is idle during competition
Time distribution
Dicover
Wall clock
Testcase1 :
-march=native 1095
-Ofast 1094
no extra flags 1096
tee 1098
Tee
SMP-CUDA
Result
Testcase | Walltime |
---|---|
1 | 1096.31 |
2 | 2540.42 |
3 | Na |
4 | 1238.44 |
5 | 1424.04 |
6 | Na |
NAMD
By zlsh80826
NAMD
- 510