Functional Magnetic Resonance Imaging (fMRI) Analysis

Analyze Your Own Data: Getting Started

  1. link to remote machine
  2. click launch session
  3. select MATE
  4. click launch

 

Setup your machine

  1. open a terminal (black box icon)
  2. gedit ~/.bashrc
  3. add the following lines to the .bashrc file:




     
  4. type "fsl &" in the terminal 
export FSLDIR=/opt/fsl
export PATH=${FSLDIR}/bin:\
/opt/mricron/:\
${PATH}
export LD_LIBRARY_PATH=/opt/fsl/extralibs
. ${FSLDIR}/etc/fslconf/fsl.sh

Download the Data: Wait for instructions

Intro to fMRI Analysis

By James Kent

Intro to fMRI Analysis

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