RNA Velocity of single cells

Single-Cell Transcriptomics Meets Lineage Tracing, Oudenaarden et al 2018

Definitions

  • Pseudotime
  • Concordant/Discordant
  • ICA, PCA, t-SNE
  • Spliced, unspliced
  • intronic polyA/polyT

Gene specific parameters, structure based, kNN

lineage trajectory in cancer?

RNA Velocity

By jmazz

RNA Velocity

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