Solve WindowsProphet's Issue

Report table's New Look

Issue 2 - Search Engine Parameter files

1. Comet

Comet

• In command line : Parameter file path, sequence db path
• In Parameter file : sequence db path

2. Tandem

Tandem

• Command Line : New parameter file
• New parameter file : input path, output path, taxonomy file path, kscore file path
• Taxonomy file : sequence db path

Issue - How to deal with those files?

• generate files by program, automatically include the paths
• Let users to modify on their own