bloom-baker-dms-for-ab-design

How deep mutational scanning of viral proteins might aid do novo design of antibody countermeasures (brainstorming slides for Bloom and Baker labs)

rsv-antibodies

Complete definition of how viral mutations affect antibodies used to prevent RSV in infants

flu-seqneut-2025to2026

Near real-time data on the human neutralizing antibody landscape to influenza virus to inform vaccine-strain selection

ceirr-sab-2025

Near real-time data on the human neutralizing antibody landscape to influenza virus to inform vaccine-strain selection in September 2025

flu-seqneut-2025

Near real-time data on the human neutralizing antibody landscape to influenza virus to inform vaccine-strain selection in September 2025

chikv-e-host-dms

Pseudovirus deep mutational scanning of the CHIKV envelope proteins in different cell lines

asv-2025

Interpreting viral evolution

grc2025

Estimating effects of mutations to all SARS-CoV-2 proteins from actual versus expected mutation counts in natural sequences

microbe-2025

Interpreting viral evolution

virus-evol-general

Virus Evolution: From SARS-CoV-2 to Avian Influenza

fda-2025

Interpreting viral evolution

vaxco-2025

viral-evol-2025

Interpreting viral evolution

awaji-cov-vax

Viral evolution and COVID-19 vaccines

awaji-cov

Interpreting SARS-CoV-2 evolution

sars2evol

Interpreting SARS-CoV-2 evolution

seqneut-analysis

How to fit tens of thousands of neutralization curve (neutcurve and seqneut-pipeline)

nasem-h5

Presentation for Oct-22-2024 NASEM workshop on research priorities for H5N1

spikemuts_2024-10-16

Analysis of spike mutations in XEC and other currently important SARS-CoV-2 variants as of Oct-16-2024

embo-workshop

Interpreting evolution of SARS-CoV-2 and other viruses